Cell Biology & Histology


Cell Biology & Histology

anatomy



The word cell comes from the Latin “cella”, meaning small room. It was coined by Robert Hooke in his book Micrographia (1665), in which he compared the cork cells he saw through his microscope to the small rooms monks lived in.

The fundamental unit of life

All organisms are made of cells. The cells is the simplest collection of matter that can live. A cell is chemical system that is able to maintain its structure and reproduce. Cell structure is related to cell function. All cells derive from a common descending cell, stem cells.

Cell shapes & size

Cell structure is related to cell function

  • Prokaryotic: 1–10 μm
  • Eukaryotic: 10 - 100 μm (1μm = .001 mm)

Levels of organisation

  1. Atom - simplest form of an element
  2. Molecules (DNA) - two or more atoms held together
  3. Cellular - is the simplest collection of matter that can live. It has a chemical system that is able to maintain its structure and reproduce.
  4. Tissue - an ensemble of similar cells that together carry out a specific function.
  5. Organ - different tissue types that work together to carry out a particular function
  6. System - a group of organs that carry out a basic function of the organism
  7. Organism - a single complete individual

Human Body Tissues

Here are a few examples of tissues in a human body:

  • Connective Tissue
  • Skeletal Tissue - voluntary muscle
  • Epithelial Tissue - lines the internal organs and skin
  • Nervous Tissue - in the brain
  • Cardiac Muscle - in the heart
  • Smooth Muscle - in the intestines

Why cells are small?

They are small because they need to facilitate passive diffusion (no energy required). These molecules need to diffuse from a higher potential down a gradient to a lower potential.

Passive Diffusion
  • Gases: 02, C02, N2
  • Water: H20
  • Urea: NH2-CO-NH2
  • Small uncharged molecules: Ethanol

For effective diffusion: A small volume & a big surface area

How do we study cells

There are two main techniques:

  1. Microscopy: Light Microscopy (LM) and Electron Microscopy (EM) provide us with structural information
  2. Biochemistry: Cell fractionation and Ultra-Centrifugation provide us with functional information
Light Microscopy LM
  • 200nm resolution
  • 1000x magnification
  • Animal, Bacterial & Plant cells
  • Nucleus, organelles
Electron Microscopy EM
  • 0.5nm resolution
  • 10,000,000x magnification
  • Ultra-structural images
Cell Fractionation

This helps us to determine the functions of organelles & the interaction of molecules:

  • Homogenization: opens cells
  • Fractionation: separate different organelles

Cell Types

Common features in all cells include:

  • Plasma membrane – outer layer
  • Semi-fluid substance – cytosol
  • Chromosomes – carry genes
  • Ribosomes – make proteins
Prokaryote Eukaryote
Lack membrane-bound organelles (nucleus, mitochondria) Have membrane-bound organelles (nucleus, mitochondria)
DNA – nucleoid DNA – packed within the nucleus and organized in chromosomes
Mostly monocellular organisms (bacteria, archaea) Mostly multicellular organisms (Plants, animals, fungus)
Quite small (1–10 μm) Much bigger than prokaryotic cells (10–100 μm)

Eukaryotic Cell Structure in detail

Diagram coming soon

Plasma membrane

This is the outer layer of the cell

  • Phospholipid Bilayer
  • Embedded proteins, lipids, carbohydrates
  • Controls substances, signals into and out of the cells
  • Helps maintain cytoplasmic composition, cell volume

Functions of the membrane proteins include:

  • Receptor
  • Enzyme
  • Ion Channel
  • Gated Ion Channel
  • Cell-identify marker
  • Cell-adhesion molecule (CAM)
Cell nucleus

This is at the centre of the cell and is surrounded by the nuclear envelope. It is perforated by nuclear pores which are channels that regulate molecular traffic into and out of the organelle. A nucleus also contains Chromatin which is the genetic material of the cell (DNA) wrapped around proteins. In the centre go the nuclei is the nucleolus and this contains the genetic material for producing ribosomes.

DNA structure

Nucleotides are the building block of DNA They have:

  • a nitrogenous base
  • a pentose sugar
  • a phosphate group

Changing the base = changes the type of nucleotide. There are two types of nitrogenous bases:

  • Purines - Adenine, Guanine (2 carbon stains)
  • Pyrimidines - Cytosine, Thymine, Uracil (1 carbon stain)

To form the double helix:

  • The bases are oriented in the inner part of and form hydrogen bonds (weak) e.g. A=T, G≣C
  • The backbone is a repetition of Phosphate- Deoxyribose (covalent- strong)
Endoplasmic reticulum

Is a network of sacs directly contacted with the nucleus. These sacs are continuous & interconnected – one single lumen/ cisternal space. This allows molecules to be selectively transferred between nucleus-ER-cytoplasm. There are two types of ER:

  • Rough ER: Has ribosomes on its surface (hence its rough appearance) - it is involved in production of proteins.
  • Smooth ER: Packing the proteins in vesicles for transport, synthesis of steroids& lipids, Ca+2 storage (muscle), detox (liver).
Golgi Complex

Is a system of cisternae that synthesize carbohydrates. It receives newly synthesized proteins from the rough ER and puts the finishing touches on synthesis.

  • Modifications: cutting, splicing, addition of carbohydrate.
  • Finally packages the proteins inmembrane-bounded Golgi vesicles for delivery.
Mitochondria

These organelles are the ‘powerhouses’ of the cell. It is made up of folded membranes (cristae) inside a membrane. ATP production occurs in the inner membrane where enzymes catalyze the respiration of pyruvic acid to ATP. Their main function is the conversion of the potential energy of food molecules into ATP (“oxidative phosphorylation”, “Krebs Cycle”):

Aerobic Respiration

C6H12O6 + 6O2 + 6H2O → 12H2O + 6CO2 + (36)ATP

Lysosomes

These are the waste bins of the cell. They contain digestive enzymes and have an extremely low pH to break down foreign particles or damaged organelles.

Cytoskeleton

Collection of filaments and cylinders that provide structural support, mobility, organization:

  • Microfilaments (actin): cell movement, muscle contraction, wound healing.
  • Intermediate filaments (keratin-epidermal cells): resist stress and participate in cell-cell junctions/ anchor of neighboring cells.
  • Microtubules (tubulin): cell movements, movements of organelles within the cytoplasm, movement of chromosomes during cell division.

Tissue

Tissue is mainly comprised of cells and a matrix. The matrix is composed of fibrous proteins and, usually, a clear gel variously known as ground substance, tissue fluid, extracellular fluid (ECF), interstitial fluid, or tissue gel. In cartilage and bone it can be rubbery or stony in consistency. The ground substance contains water, gases, minerals, nutrients, wastes, and other chemicals. There are many different types of tissues, examples include:

Type Definition Locations
Epithelial Tissue composed of layers of closely spaced cells that cover organ surfaces, form glands, and serve for protection, secretion, and absorption Epidermis
Inner lining of digestive tract
Liver and other glands
Connective Tissue with more matrix than cell volume, often specialised to support, bind together, and protect organs Tendons and ligaments
Cartilage and bone
Blood
Nervous Tissue containing excitable cells specialised for rapid transmission of coded information to other cells Brain
Spinal Cord
Nerves
Muscular Tissue composed of elongated, excitable cells specialised for contraction Skeletal muscles
Heart (cardiac muscle)
Walls of viscera (smooth muscles)

Chapter 2 to be completed soon


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Written by Tobias Whetton